Bioinformatics group: Publications

Click here to download all publications in a single bibtex file

@inproceedings{GeometricSNP,
  title = "A Geometrical Model for the SNP Motif Identification Problem",
  author = "Gaofeng Huang and Peter Jeavons",
  year = "2007",
  booktitle = "Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007",
  isbn = "978-1-4244-1509-0 ",
  pages = "395-402",
  url = "http://ieeexplore.ieee.org/search/wrapper.jsp?arnumber=4375593",
  doi = "10.1109/BIBE.2007.4375593",
}

@inproceedings{ExactHeuristicSNP,
  title = "Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs",
  author = "Gaofeng Huang and Peter Jeavons and Dominic Kwiatkowski",
  year = "2007",
  booktitle = "Proceedings of 5th Asia-Pacific Bioinformatics Conference, APBC 2007",
  isbn = "978-1-86094-783-4",
  pages = "175-184",
  publisher = "Imperial College Press",
  series = "Advances in Bioinformatics and Computational Biology",
  volume = "5",
}

@article{EnhancingBindingSitePrediction,
  title = "Enhancing the prediction of transcription factor binding sites by incorporating structural properties and nucleotide covariations",
  author = "S. Gunewardena, P. Jeavons, Z. Zhang",
  year = "2006",
  journal = "Journal of Computational Biology",
  number = "4",
  pages = "929-945",
  url = "http://www.liebertonline.com/doi/abs/10.1089/cmb.2006.13.929",
  volume = "13",
  doi = "10.1089/cmb.2006.13.929",
}

@article{OperonMycobacteriumBovis,
  title = "Characterization of the putative operon containing arylamine N-acetyltransferase (nat) in Mycobacterium bovis BCG",
  author = "M. Anderton, S. Bhakta, G. Besra, P. Jeavons, L. Eltis, E. Sim",
  year = "2006",
  journal = "Molecular Microbiology",
  number = "1",
  pages = "181-192",
  url = "http://www.blackwell-synergy.com/doi/abs/10.1111/j.1365-2958.2005.04945.x",
  volume = "59",
  doi = "10.1111/j.1365-2958.2005.04945.x",
}

@techreport{RR-05-03,
  title = "Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs",
  author = "Gaofeng Huang and Peter Jeavons and Dominic Kwiatkowski",
  year = "2005",
  institution = "Oxford University Computing Laboratory",
  month = "July",
  number = "RR-05-03",
}

@techreport{RR-04-24,
  title = "Information categorisation in biological sequence alignments",
  author = "Sumedha Gunewardena and Peter Jeavons",
  year = "2004",
  institution = "Oxford University Computing Laboratory",
  month = "November",
  number = "RR-04-24",
}

@techreport{RR-03-21,
  title = "Finding transcription factor binding sites in DNA Sequences: A template based approach",
  author = "Sumedha Gunewardena and Peter Jeavons",
  year = "2003",
  institution = "Oxford University Computing Laboratory",
  month = "October",
  number = "RR-03-21",
}

@article{AgaroseGelImage,
  title = "Automatic analysis of agarose gel images",
  author = "P. S. Umesh Adiga, A. Bhomra, M. G. Turri, A. Nicod, S. R. Datta, Peter Jeavons, Richard Mott, Jonathan Flint",
  year = "2001",
  journal = "Bioinformatics",
  number = "11",
  pages = "1084-1089",
  url = "http://bioinformatics.oxfordjournals.org/cgi/content/abstract/17/11/1084",
  volume = "17",
}