Bioinformatics group: Publications

Journal papers

• [1]

  Enhancing the prediction of transcription factor binding sites by incorporating structural properties and nucleotide covariations

  Z. Zhang S. Gunewardena P. Jeavons

  In Journal of Computational Biology. Vol. 13. No. 4. Pages 929−945. 2006.

  Details about Enhancing the prediction of transcription factor binding sites by incorporating structural properties and nucleotide covariations | BibTeX data for Enhancing the prediction of transcription factor binding sites by incorporating structural properties and nucleotide covariations | DOI (10.1089/cmb.2006.13.929) | Link to Enhancing the prediction of transcription factor binding sites by incorporating structural properties and nucleotide covariations

• [2]

  Characterization of the putative operon containing arylamine N−acetyltransferase (nat) in Mycobacterium bovis BCG

  E. Sim M. Anderton S. Bhakta G. Besra P. Jeavons L. Eltis

  In Molecular Microbiology. Vol. 59. No. 1. Pages 181−192. 2006.

  Details about Characterization of the putative operon containing arylamine N−acetyltransferase (nat) in Mycobacterium bovis BCG | BibTeX data for Characterization of the putative operon containing arylamine N−acetyltransferase (nat) in Mycobacterium bovis BCG | DOI (10.1111/j.1365-2958.2005.04945.x) | Link to Characterization of the putative operon containing arylamine N−acetyltransferase (nat) in Mycobacterium bovis BCG

• [3]

  Automatic analysis of agarose gel images

  Jonathan Flint P. S. Umesh Adiga A. Bhomra M. G. Turri A. Nicod S. R. Datta Peter Jeavons Richard Mott

  In Bioinformatics. Vol. 17. No. 11. Pages 1084−1089. 2001.

  Details about Automatic analysis of agarose gel images | BibTeX data for Automatic analysis of agarose gel images | Link to Automatic analysis of agarose gel images

Conference papers

• [1]

  A Geometrical Model for the SNP Motif Identification Problem

  Gaofeng Huang and Peter Jeavons

  In Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering‚ BIBE 2007. Pages 395−402. 2007.

  Details about A Geometrical Model for the SNP Motif Identification Problem | BibTeX data for A Geometrical Model for the SNP Motif Identification Problem | DOI (10.1109/BIBE.2007.4375593) | Link to A Geometrical Model for the SNP Motif Identification Problem

• [2]

  Exact and Heuristic Approaches for Identifying Disease−Associated SNP Motifs

  Gaofeng Huang‚ Peter Jeavons and Dominic Kwiatkowski

  In Proceedings of 5th Asia−Pacific Bioinformatics Conference‚ APBC 2007. Vol. 5 of Advances in Bioinformatics and Computational Biology. Pages 175−184. Imperial College Press. 2007.

  Details about Exact and Heuristic Approaches for Identifying Disease−Associated SNP Motifs | BibTeX data for Exact and Heuristic Approaches for Identifying Disease−Associated SNP Motifs

Technical reports

• [1]

  Exact and Heuristic Approaches for Identifying Disease−Associated SNP Motifs

  Gaofeng Huang‚ Peter Jeavons and Dominic Kwiatkowski

  No. RR−05−03. Oxford University Computing Laboratory. July, 2005.

  Details about Exact and Heuristic Approaches for Identifying Disease−Associated SNP Motifs | BibTeX data for Exact and Heuristic Approaches for Identifying Disease−Associated SNP Motifs | Download  (ps) of Exact and Heuristic Approaches for Identifying Disease−Associated SNP Motifs

• [2]

  Information categorisation in biological sequence alignments

  Sumedha Gunewardena and Peter Jeavons

  No. RR−04−24. Oxford University Computing Laboratory. November, 2004.

  Details about Information categorisation in biological sequence alignments | BibTeX data for Information categorisation in biological sequence alignments | Download  (ps) of Information categorisation in biological sequence alignments

• [3]

  Finding transcription factor binding sites in DNA Sequences: A template based approach

  Sumedha Gunewardena and Peter Jeavons

  No. RR−03−21. Oxford University Computing Laboratory. October, 2003.

  Details about Finding transcription factor binding sites in DNA Sequences: A template based approach | BibTeX data for Finding transcription factor binding sites in DNA Sequences: A template based approach | Download  (ps) of Finding transcription factor binding sites in DNA Sequences: A template based approach